Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBFG_00935Transcriptional regulator, AraC family. (298 aa)    
Predicted Functional Partners:
nifJ-2
Pyruvate synthase.
     
 0.770
CBFG_01886
Transcriptional regulator, AraC family.
  
     0.770
CBFG_04395
Transcriptional regulator, AraC family.
  
     0.769
CBFG_00063
Transcriptional regulator, AraC family.
  
     0.768
CBFG_01123
Transcriptional regulator, AraC family.
  
     0.764
CBFG_04196
Transcriptional regulator, AraC family.
  
   0.762
CBFG_01826
Transcriptional regulator, AraC family.
  
     0.753
CBFG_01341
Transcriptional regulator, AraC family.
  
     0.752
CBFG_04502
Transcriptional regulator, AraC family.
  
     0.749
CBFG_06073
Transcriptional regulator, AraC family.
  
  
  0.744
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.