CBFG_02090 protein (Clostridiales bacterium 1747FAA)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

CBFG_02090

ABC transporter, solute-binding protein. (445 aa)

Predicted Functional Partners:

CBFG_02089

0.989

CBFG_02088

0.900

CBFG_02210

0.755

CBFG_04802

0.742

CBFG_04149

0.735

CBFG_05346

0.727

CBFG_00622

0.711

CBFG_01394

0.705

CBFG_01809

0.702

CBFG_05071

0.695

Your Current Organism:

Clostridiales bacterium 1747FAA

NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CBFG_00622	CBFG_01394	ABC transporter, permease protein.	ABC transporter, solute-binding protein.	0.535
CBFG_00622	CBFG_02088	ABC transporter, permease protein.	ABC transporter, permease protein.	0.867
CBFG_00622	CBFG_02090	ABC transporter, permease protein.	ABC transporter, solute-binding protein.	0.711
CBFG_01394	CBFG_00622	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.535
CBFG_01394	CBFG_01809	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.670
CBFG_01394	CBFG_02088	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.459
CBFG_01394	CBFG_02089	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.454
CBFG_01394	CBFG_02090	ABC transporter, solute-binding protein.	ABC transporter, solute-binding protein.	0.705
CBFG_01394	CBFG_02210	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.542
CBFG_01394	CBFG_04149	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.559
CBFG_01394	CBFG_04802	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.662
CBFG_01394	CBFG_05071	ABC transporter, solute-binding protein.	ABC transporter, permease protein.	0.549
CBFG_01394	CBFG_05346	ABC transporter, solute-binding protein.	Putative L-arabinose transport system permease protein AraP.	0.707
CBFG_01809	CBFG_01394	ABC transporter, permease protein.	ABC transporter, solute-binding protein.	0.670
CBFG_01809	CBFG_02088	ABC transporter, permease protein.	ABC transporter, permease protein.	0.843
CBFG_01809	CBFG_02090	ABC transporter, permease protein.	ABC transporter, solute-binding protein.	0.702
CBFG_02088	CBFG_00622	ABC transporter, permease protein.	ABC transporter, permease protein.	0.867
CBFG_02088	CBFG_01394	ABC transporter, permease protein.	ABC transporter, solute-binding protein.	0.459
CBFG_02088	CBFG_01809	ABC transporter, permease protein.	ABC transporter, permease protein.	0.843
CBFG_02088	CBFG_02089	ABC transporter, permease protein.	ABC transporter, permease protein.	0.967