Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
CBFG_02432D-galactarate dehydratase/altronate hydrolase domain protein. (384 aa)    
Predicted Functional Partners:
CBFG_02433
SAF domain protein.
 
  
  0.962
CBFG_05788
Mannitol dehydrogenase domain protein.
 
 0.890
CBFG_00801
SAF domain protein.
 
  
  0.876
CBFG_02396
SAF domain protein.
  
     0.774
CBFG_02434
Putative 2-keto-3-deoxygluconate transporter.
 
    0.739
CBFG_02431
FAH family protein.
 
     0.733
CBFG_02430
Dihydrodipicolinate synthetase family; Belongs to the DapA family.
    
 0.724
CBFG_01981
HpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.604
CBFG_00429
Kinase, PfkB family.
    
 0.567
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
  0.567
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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