Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBFG_02444Transporter gate domain protein. (645 aa)    
Predicted Functional Partners:
CBFG_00999
FeoA domain protein.
 
  
 0.921
CBFG_03375
FeoA domain protein.
 
  
 0.911
CBFG_01000
FeoA domain protein.
 
  
 0.799
feoB-3
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
0.769
CBFG_05700
FeoA domain protein.
  
  
 0.673
ytvI
Sporulation integral membrane protein YtvI.
       0.480
nifJ
Pyruvate synthase.
 
   
 0.459
CBFG_02443
Hypothetical protein.
       0.452
CBFG_02446
Hypothetical protein.
 
     0.417
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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