Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CBFG_02463Potassium uptake protein, TrkH family. (492 aa)    
Predicted Functional Partners:
CBFG_02464
TrkA N-terminal domain protein.
 
 
 0.962
CBFG_02465
TrkA N-terminal domain protein.
 
 
 0.958
CBFG_02460
TrkA N-terminal domain protein.
 
 
 0.925
CBFG_02461
TrkA N-terminal domain protein.
 
 
 0.914
CBFG_05453
TrkA N-terminal domain protein.
 
 
 0.890
CBFG_02462
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
     
 0.791
CBFG_05641
Chloride transporter, ClC family.
  
 
 0.635
CBFG_00493
Putative Ktr system potassium uptake protein A.
  
 
 0.569
CBFG_03223
TrkA N-terminal domain protein.
  
 
 0.569
nifJ
Pyruvate synthase.
   
   0.517
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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