Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBFG_03422MATE efflux family protein. (442 aa)    
Predicted Functional Partners:
CBFG_03423
Putative multidrug-efflux transporter 2 regulator.
 
     0.633
CBFG_00284
MATE efflux family protein.
  
     0.572
CBFG_04066
Ribosomal protein L7Ae.
    
  0.560
CBFG_03424
Hypothetical protein.
       0.548
CBFG_03333
Hypothetical protein.
   
    0.546
CBFG_00649
MATE efflux family protein.
  
     0.524
CBFG_04536
MATE efflux family protein.
  
     0.509
CBFG_02199
MATE efflux family protein.
  
     0.499
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.492
CBFG_02221
MATE efflux family protein.
  
     0.455
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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