Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBFG_03484Cell wall-binding repeat protein. (372 aa)    
Predicted Functional Partners:
CBFG_06031
Cell wall-binding repeat protein.
  
  
 0.803
CBFG_00762
Cell wall-binding repeat protein.
  
  
 0.801
CBFG_02068
Cell wall-binding repeat protein.
  
     0.769
CBFG_05796
Cell wall-binding repeat protein.
  
     0.764
CBFG_05889
Cell wall-binding repeat protein.
  
     0.764
CBFG_02552
Cell wall-binding repeat protein.
  
     0.762
CBFG_05921
Cell wall-binding repeat protein.
  
     0.760
CBFG_01495
Cell wall-binding repeat protein.
 
  
 0.759
CBFG_04590
Hypothetical protein.
  
     0.750
CBFG_03865
Putative N-acetylmuramoyl-L-alanine amidase.
 
 
 0.748
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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