STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaKDihydroxyacetone kinase, DhaK subunit; Truncated CDS. (328 aa)    
Predicted Functional Partners:
CBFG_03934
Dihydroxyacetone kinase, phosphotransfer subunit.
 
 0.997
CBFG_06098
DAK2 domain protein.
 
 0.979
CBFG_04741
DAK2 domain protein.
 
 0.969
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.790
gpsA
Putative glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.754
CBFG_02988
3-dehydroquinate synthase.
  
 
 0.717
CBFG_03392
Alcohol dehydrogenase, iron-dependent.
  
 
 0.717
CBFG_03928
MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.717
CBFG_03929
FAD dependent oxidoreductase.
    
  0.613
CBFG_01922
Putative sugar-binding domain protein.
   
  0.524
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.