STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBFG_05669Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein. (466 aa)    
Predicted Functional Partners:
CBFG_05668
Oxidoreductase, short chain dehydrogenase/reductase family protein.
    
  0.749
CBFG_05667
Oxidoreductase, short chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.742
CBFG_05665
Hypothetical protein.
 
    0.740
rbsA-9
Sugar ABC transporter, ATP binding protein.
       0.723
CBFG_02283
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein.
  
     0.716
CBFG_05666
4Fe-4S binding domain protein.
       0.712
CBFG_05671
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.680
CBFG_05672
Hypothetical protein.
       0.579
CBFG_01825
D-mannonate dehydratase (UxuA); Catalyzes the dehydration of D-mannonate.
  
  
 0.535
CBFG_05673
Hypothetical protein.
  
 
  0.511
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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