Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL20292.1Copper-exporting ATPase. (826 aa)    
Predicted Functional Partners:
EFL25997.1
Heavy metal-associated domain protein.
 
 
 0.818
EFL20290.1
Conserved domain protein.
 
 
 0.810
EFL22179.1
Conserved domain protein.
 
 
 0.798
EFL20293.1
Putative membrane protein.
       0.795
EFL20291.1
Hypothetical protein.
       0.786
EFL21215.1
Putative heavy metal-associated domain protein.
  
 
 0.721
EFL20695.1
E1-E2 family cation-transporting ATPase.
 
 
 
0.474
EFL25118.1
Glycosyl transferase.
  
  
 0.436
EFL21216.1
Conserved hypothetical protein.
 
  
 0.430
EFL26547.1
Superoxide dismutase, copper/zinc binding.
    
 0.428
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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