Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20297.1AraC family transcriptional regulator. (278 aa)    
Predicted Functional Partners:
EFL20298.1
phytanoyl-CoA dioxygenase (PhyH) superfamily protein.
 
     0.941
EFL20299.1
Hypothetical protein.
  
    0.730
EFL21262.1
PE-PGRS family protein.
 
     0.504
EFL26223.1
AraC family transcriptional regulator.
  
   0.497
EFL23791.1
PE-PGRS family protein.
  
    0.457
EFL28807.1
Putative ABC-type sulfonate transport system.
  
     0.436
EFL23789.1
Conserved hypothetical protein.
  
     0.427
EFL29261.1
Putative transcriptional regulator, AraC family.
  
   0.426
EFL29345.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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