STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20312.1L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family. (362 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.888
EFL25556.1
orn/DAP/Arg decarboxylase, family 2.
     
 0.888
EFL20313.1
Putative LigA.
 
     0.820
EFL21776.1
Lysine monooxygenase.
    
  0.806
EFL26051.1
Lysine monooxygenase.
    
  0.806
EFL23202.1
Putative pyridoxal-dependent decarboxylase, C- sheet domain protein.
     
 0.791
EFL27281.1
Pyridoxal-dependent decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.791
EFL20314.1
Putative vegetative cell wall protein gp1 (Hydroxyproline-richglycoprotein 1).
       0.746
EFL20452.1
Flavin-containing superfamily amine oxidase.
    
  0.737
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.692
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.