STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20343.1Putative mucin-2 (MUC-2) (Intestinal mucin-2); truncated CDS; Belongs to the FPP/GGPP synthase family. (468 aa)    
Predicted Functional Partners:
EFL22054.1
Squalene synthase HpnD.
  
 0.837
EFL22055.1
Squalene synthase HpnC.
  
 0.837
EFL21296.1
Phytoene dehydrogenase (Phytoene desaturase); Unextendable partial coding region.
  
 
 0.801
EFL21469.1
Putative oxidoreductase.
  
 
 0.801
EFL22375.1
P49 protein.
  
 
 0.801
EFL26843.1
Putative phytoene dehydrogenase.
  
 
 0.801
EFL23032.1
Putative glycine-sarcosine methyltransferase.
  
 
 0.772
EFL20342.1
Daunorubicin resistance ATP-binding protein.
 
     0.764
EFL20946.1
Hydroxylase.
  
 0.737
EFL21293.1
Putative lycopene cyclase.
  
 0.737
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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