Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20346.1LigA protein. (365 aa)    
Predicted Functional Partners:
EFL22435.1
Guanyl-specific ribonuclease Sa3 (RNase Sa3).
  
 
 0.902
EFL24102.1
Conserved hypothetical protein.
  
     0.662
EFL29200.1
Translation initiation factor IF-2.
  
     0.608
EFL29352.1
Leucine rich repeat variant (3 repeats).
  
     0.583
EFL29187.1
Putative hydroxyurea phosphotransferase.
 
     0.573
EFL24107.1
Putative integral membrane protein.
       0.572
htpX
Heat shock protein HtpX; Belongs to the peptidase M48B family.
       0.572
EFL22181.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2).
  
     0.554
EFL22187.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
     0.479
EFL25378.1
Conserved hypothetical protein.
  
     0.451
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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