STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20349.1Transporter, NCS1 nucleoside transporter; Belongs to the purine-cytosine permease (2.A.39) family. (516 aa)    
Predicted Functional Partners:
ureC
Urease, alpha subunit.
     
 0.699
EFL25935.1
Agmatinase; Belongs to the arginase family.
    0.563
EFL23269.1
Agmatinase; Belongs to the arginase family.
    0.547
EFL21568.1
LigA protein.
 
     0.537
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.483
EFL23732.1
Cobalt ABC transporter, ATP-binding protein.
      
 0.482
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
   
    0.479
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
   
    0.478
EFL21801.1
Putative integral membrane protein; Truncated CDS; unextendable partial coding region.
   
    0.463
EFL20350.1
LigA protein.
       0.429
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.