STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20351.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
EFL29240.1
Hydroxyquinol 1,2-dioxygenase (1,2-HQD).
 
 
 0.950
EFL28285.1
Catechol 1,2-dioxygenase.
 
 
 0.895
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
  
 
 0.893
EFL23140.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 
 0.878
EFL26930.1
Glutamate synthase large subunit.
   
 
 0.818
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
 
  
 0.803
EFL27277.1
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Truncated CDS.
     
 0.791
EFL22114.1
3-oxoadipate enol-lactonase.
     
 0.777
EFL29006.1
Catechol 1,2-dioxygenase 1 (1,2-CTD 1) (CDI1).
 
 
 0.763
EFL27772.1
Oxidoreductase.
  
 0.761
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.