STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20361.1Na+/H+ antiporter. (484 aa)    
Predicted Functional Partners:
EFL24917.1
Putative TrkA-C domain protein.
 
  
 0.857
EFL24319.1
Quinone family NAD(P)H dehydrogenase.
 
 
 0.696
EFL23286.1
General stress protein 14 (GSP14).
  
 
 0.649
EFL22730.1
HPr family phosphocarrier.
    
  0.522
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
   
 
 0.488
EFL20362.1
Hypothetical protein.
       0.476
EFL20663.1
E1-E2 family cation-transporting ATPase.
  
 
 0.436
EFL24130.1
Putative membrane protein.
 
   
 0.424
EFL20363.1
Two-component system sensor kinase.
       0.403
EFL20364.1
LuxR family DNA-binding response regulator.
       0.401
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.