Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20365.1Conserved hypothetical protein. (164 aa)    
Predicted Functional Partners:
EFL27820.1
Putative regulator of sigma factor.
  
     0.571
EFL24557.1
Putative assimilatory nitrate reductase/sulfite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
  0.536
EFL27299.1
Putative transporter, Ni2+-Co2+ transporter (NiCoT) family; Unextendable partial coding region.
  
     0.522
EFL26205.1
Putative membrane protein.
  
     0.514
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
  
 
 0.501
EFL20366.1
Putative transposase.
  
    0.500
EFL20367.1
Putative transposase.
  
    0.500
EFL25380.1
Putative regulator of sigma factor.
  
     0.459
EFL23077.1
XRE family transcriptional regulator.
  
     0.423
EFL21914.1
Conserved hypothetical protein.
  
     0.422
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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