STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20372.1Enantio-pyochelin biosynthetic protein PchC. (263 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
 
 
 0.990
EFL27601.1
Polyketide synthase; Truncated CDS.
 
 
 0.983
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.979
EFL28780.1
Non-ribosomal peptide synthetase.
 
 
 0.956
EFL20373.1
Putative type I polyketide synthase WcbR.
  
 
 0.954
EFL21631.1
Non-ribosomal peptide synthetase, component; Overlaps another CDS with the same product name.
 
 
 0.952
EFL21150.1
Linear gramicidin synthetase LgrC.
 
 
 0.879
EFL28177.1
Linear gramicidin synthetase LgrC.
 
 
 0.879
EFL21629.1
Pyoverdine chromophore synthetase.
 
 
 0.855
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
 
 
 0.850
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.