STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20382.1Aspartate ammonia-lyase. (473 aa)    
Predicted Functional Partners:
EFL23529.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.868
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
  
 0.865
EFL25087.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
  
 0.865
EFL21043.1
L-asparaginase; Unextendable partial coding region.
  
 
 0.843
EFL23513.1
Asparaginase.
  
 
 0.843
EFL26887.1
L-asparaginase.
  
 
 0.843
EFL21235.1
Asparagine synthase (glutamine-hydrolyzing).
     
 0.826
EFL27773.1
Asparagine synthase (glutamine-hydrolyzing).
     
 0.826
EFL23292.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
     
 0.824
EFL25055.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.823
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.