STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20392.1Putative hydantoin utilization protein; Truncated CDS. (701 aa)    
Predicted Functional Partners:
EFL21438.1
Hydantoinase/oxoprolinase.
 0.997
EFL21439.1
Hydantoinase/oxoprolinase; Truncated CDS.
 
0.920
EFL26930.1
Glutamate synthase large subunit.
    
 0.851
EFL20391.1
Major facilitator family transporter.
       0.773
EFL22398.1
Hydrolase.
    
 0.518
EFL20393.1
Putative transcriptional regulatory protein (TetR family).
       0.466
EFL20390.1
IclR family KdgR transcriptional regulator.
       0.437
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.