STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20409.1Rieske (2Fe-2S) region; Truncated CDS. (205 aa)    
Predicted Functional Partners:
EFL28296.1
Ring hydroxylating beta subunit family protein.
  
 0.906
EFL29030.1
Benzoate 1,2-dioxygenase, small subunit.
  
 0.906
EFL21194.1
Biphenyl 2,3-dioxygenase, beta subunit.
  
 0.897
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
 
 
 0.821
EFL23862.1
FAD dependent oxidoreductase.
 
 
 0.818
EFL21418.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
 
 
 0.817
EFL23861.1
Putative N,N-dimethylglycine oxidase.
 
 
 0.767
EFL20436.1
Sarcosine oxidase, alpha subunit.
 
 
  0.748
EFL20437.1
Sarcosine oxidase, delta subunit.
 
    0.744
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
  
 
 0.719
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.