Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL20410.1ABC transporter, permease. (273 aa)    
Predicted Functional Partners:
EFL20411.1
Sugar ABC transporter, permease.
 
  0.983
EFL25135.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.960
EFL20412.1
Putative sugar ABC transporter, substrate-binding protein.
 
 0.958
EFL28085.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 0.950
EFL26279.1
Putative sugar ABC transporter, permease protein.
 
 0.944
EFL20936.1
Transmembrane permease MsmF.
 
  0.931
EFL25664.1
ABC transporter, permease.
 
  0.923
EFL20477.1
Sugar ABC transporter, permease.
 
  0.915
EFL20937.1
Putative sugar ABC transporter, substrate-binding protein.
 
 0.907
EFL21716.1
ABC transporter, permease.
 
 0.881
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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