Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL20414.1Putative glycosyl hydrolase. (374 aa)    
Predicted Functional Partners:
EFL23511.1
Conserved hypothetical protein.
  
     0.663
EFL20413.1
Putative aga operon transcriptional repressor.
       0.495
EFL25960.1
Putative alpha/beta hydrolase family protein.
  
     0.484
EFL22394.1
Translation initiation factor IF-2.
  
     0.469
EFL20431.1
Conserved hypothetical protein.
  
     0.463
EFL23120.1
Putative FG-GAP repeat protein.
 
     0.457
EFL23790.1
Putative lipase; Truncated CDS; unextendable partial coding region.
  
     0.418
EFL20412.1
Putative sugar ABC transporter, substrate-binding protein.
 
     0.408
EFL26515.1
Putative S-layer domain protein.
  
     0.407
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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