STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20425.1Putative N-acetylmuramoyl-L-alanine amidase. (289 aa)    
Predicted Functional Partners:
EFL24666.1
LigA protein.
  
     0.720
EFL23615.1
Putative membrane protein.
  
     0.691
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.686
EFL21488.1
Conserved hypothetical protein.
  
     0.679
EFL25240.1
Putative PAS fold protein; Unextendable partial coding region.
 
     0.671
EFL25861.1
Putative M6 family metalloprotease domain protein.
  
     0.647
EFL24645.1
Conserved hypothetical protein.
  
     0.641
EFL21103.1
Axe family addiction module antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.614
EFL24688.1
Putative membrane protein.
  
     0.594
EFL22770.1
Putative secreted protein.
  
     0.578
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.