Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL20430.1Putative transport protein. (503 aa)    
Predicted Functional Partners:
EFL20428.1
Putative oxidoreductase protein.
       0.773
EFL20429.1
LigA protein; Truncated CDS.
       0.572
EFL20314.1
Putative vegetative cell wall protein gp1 (Hydroxyproline-richglycoprotein 1).
  
     0.565
EFL20431.1
Conserved hypothetical protein.
       0.522
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.497
EFL24659.1
Putative integral membrane protein.
  
     0.489
EFL24655.1
Putative integral membrane protein.
  
     0.464
EFL21818.1
Secreted protein.
  
     0.432
EFL24656.1
Putative integral membrane protein.
  
     0.430
EFL20427.1
Metabolite-proton symporter.
       0.416
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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