Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20434.1Conserved hypothetical protein. (367 aa)    
Predicted Functional Partners:
EFL20433.1
Hydrolase.
       0.701
EFL22471.1
Magnesium and cobalt transporter CorA.
       0.572
EFL23632.1
Putative transcriptional regulator.
  
     0.554
EFL22660.1
Putative monooxygenase; Unextendable partial coding region.
  
     0.552
EFL27727.1
Transposase.
  
     0.488
EFL20435.1
Sarcosine oxidase gamma subunit.
       0.485
EFL20436.1
Sarcosine oxidase, alpha subunit.
       0.485
EFL20437.1
Sarcosine oxidase, delta subunit.
       0.485
EFL20438.1
Sarcosine oxidase beta subunit.
       0.481
EFL20432.1
Putative monooxygenase.
       0.473
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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