Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20455.1Conserved hypothetical protein. (432 aa)    
Predicted Functional Partners:
EFL20458.1
Solute-binding protein of transport system.
 
     0.944
EFL20454.1
Beta-glucosidase.
       0.882
EFL20457.1
Sugar ABC transporter, permease.
 
   
 0.868
EFL20456.1
ABC transporter, permease.
 
     0.852
EFL20453.1
Putative endo-beta-N-acetylglucosaminidase.
 
     0.839
EFL20459.1
Alpha-mannosidase 2C1 (Alpha-D-mannoside mannohydrolase)(Mannosidase alpha class 2C member 1) (Alpha mannosidase 6A8B).
 
   
 0.839
EFL23765.1
PTS system, fructose-specific family, IIABC component.
     
  0.722
EFL25612.1
PTS system, fructose-specific IIABC component.
     
  0.722
EFL20460.1
Regulatory protein, LacI.
 
     0.675
EFL23104.1
Extracellular solute-binding domain protein.
  
     0.642
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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