STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20463.1Probable alginate lyase. (257 aa)    
Predicted Functional Partners:
EFL24877.1
Non-specific serine/threonine protein kinase.
    
  0.691
EFL20462.1
Non-specific serine/threonine protein kinase.
 
     0.682
EFL22321.1
Catalase HPII.
    
 0.571
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.571
EFL27770.1
Conserved hypothetical protein.
 
 
 0.543
EFL23567.1
Conserved hypothetical protein.
  
  0.540
EFL22624.1
Alpha-1,2-mannosidase.
  
     0.535
EFL20464.1
OmpA/MotB.
  
    0.528
EFL21174.1
Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
   
   0.515
EFL25886.1
Beta-galactosidase.
   
   0.515
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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