STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20466.1Splicing factor, proline- and glutamine-rich (Polypyrimidine tract-binding protein-associated-splicing factor) (PTB-associated-splicingfactor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDaDNA-pairing protein) (hPOMp100). (258 aa)    
Predicted Functional Partners:
EFL20437.1
Sarcosine oxidase, delta subunit.
  
 0.981
EFL20435.1
Sarcosine oxidase gamma subunit.
  
 0.887
EFL28519.1
Sarcosine oxidase, alpha subunit.
 
 
  0.837
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
 
 0.815
EFL21418.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
 
 0.814
EFL28520.1
Pyridine nucleotide-disulfide oxidoreductase; Unextendable partial coding region.
 
 
  0.789
EFL26930.1
Glutamate synthase large subunit.
  
 
 0.775
EFL20436.1
Sarcosine oxidase, alpha subunit.
  
 0.770
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.770
EFL23862.1
FAD dependent oxidoreductase.
  
 0.759
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.