STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20474.1NADH-dependent dehydrogenase; Overlaps another CDS with the same product name. (334 aa)    
Predicted Functional Partners:
EFL20475.1
NADH-dependent dehydrogenase; Overlaps another CDS with the same product name.
 
    
0.920
EFL20476.1
Sugar permease.
       0.778
EFL27466.1
Putative virulence factor MviM.
  
     0.734
EFL20791.1
3-amino-5-hydroxybenzoic acid synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.713
EFL23216.1
Daunorubicin biosynthesis sensory transduction protein DnrJ; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.690
EFL22811.1
Conserved hypothetical protein.
 
 
 0.672
EFL20477.1
Sugar ABC transporter, permease.
 
     0.653
EFL20582.1
Oxidoreductase, NAD-binding.
  
     0.635
EFL21936.1
Probable NDP-hexose-3-ketoreductase.
  
     0.634
EFL26010.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.632
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.