STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20508.1Conserved domain protein. (59 aa)    
Predicted Functional Partners:
EFL20509.1
Conserved hypothetical protein.
       0.890
EFL20510.1
TIGR00027 family methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
     0.850
EFL21424.1
Conserved hypothetical protein.
  
     0.520
EFL27520.1
Putative ATP/GTP binding protein.
  
     0.504
EFL21427.1
Putative membrane protein.
  
     0.502
EFL28108.1
Putative acyl-[acyl-carrier protein] desaturase.
  
     0.470
EFL21426.1
Putative membrane protein.
  
     0.462
EFL26884.1
ABC-2.
  
     0.442
EFL21506.1
Conserved hypothetical protein.
  
     0.422
EFL28104.1
Conserved hypothetical protein.
  
     0.415
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.