STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20528.1Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
EFL20529.1
Major facilitator family permease.
 
     0.838
EFL22574.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.772
EFL22123.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.771
EFL27713.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.771
EFL24549.1
LysR family transcriptional regulator.
  
     0.770
EFL27724.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.770
EFL27829.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.768
EFL20903.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.766
EFL23817.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.764
EFL27864.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.758
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.