STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20530.1Conserved hypothetical protein. (265 aa)    
Predicted Functional Partners:
EFL20529.1
Major facilitator family permease.
       0.655
EFL20528.1
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.472
EFL20531.1
Pyridoxamine 5-phosphate oxidase-related, FMN-binding protein.
       0.468
EFL24619.1
dTDP-glucose 4,6-dehydratase.
  
     0.453
EFL28234.1
LigA protein.
  
     0.440
EFL27452.1
Alpha/beta hydrolase.
     
 0.420
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.