STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20531.1Pyridoxamine 5-phosphate oxidase-related, FMN-binding protein. (140 aa)    
Predicted Functional Partners:
EFL26445.1
3-hydroxyisobutyrate dehydrogenase.
       0.605
EFL27647.1
Conserved hypothetical protein.
  
    0.527
EFL22682.1
Probable alkanesulfonate monooxygenase.
  
     0.516
EFL25809.1
MmcI protein.
  
     0.484
EFL21658.1
Conserved hypothetical protein.
   
    0.482
EFL26758.1
Putative sugar nucleotide epimerase.
   
    0.482
arcA
Arginine deiminase.
   
    0.479
EFL20530.1
Conserved hypothetical protein.
       0.468
EFL23942.1
Conserved hypothetical protein.
  
     0.466
fbiA
LPPG:FO 2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
  
  
  0.461
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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