STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20533.1Putative peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (317 aa)    
Predicted Functional Partners:
EFL26952.1
Putative branched chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.938
EFL26953.1
Putative branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.937
EFL26950.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
  
 
0.934
EFL23585.1
Glutathione ABC transporter, permease.
  
 0.849
EFL21030.1
Putative ABC transporter, permease protein.
  
 0.847
EFL28068.1
ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, permease.
  
 0.846
EFL20535.1
ABC transporter, permease.
  
 0.832
EFL23048.1
Dipeptide transporter (ABC superfamily, membrane).
  
 0.832
EFL23478.1
Peptide ABC transporter, permease.
  
 0.832
EFL23464.1
Peptide ABC transporter, permease.
  
 0.830
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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