STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20534.1ABC transporter dipeptide permease. (52 aa)    
Predicted Functional Partners:
EFL20537.1
Extracellular solute-binding protein, family 5.
 
 0.957
EFL20536.1
Nickel ABC transporter, permease.
 
 
 0.916
EFL20535.1
ABC transporter, permease.
 
     0.807
EFL20538.1
Acetyltransferase, GNAT family protein.
       0.773
EFL20539.1
Aminotransferase, class I and II family protein.
       0.773
EFL23492.1
Putative extracellular solute-binding dependent transport lipoprotein.
  
 0.648
EFL27423.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
  
 
  0.601
EFL28702.1
Putative solute-binding lipoprotein.
 
 0.585
EFL20541.1
Putative glycolate oxidase, subunit GlcD.
       0.579
EFL27426.1
Putative ABC-type dipeptide/oligopeptide transport system.
 
 0.577
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.