Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL20535.1ABC transporter, permease. (227 aa)    
Predicted Functional Partners:
EFL20536.1
Nickel ABC transporter, permease.
 
 0.979
EFL20537.1
Extracellular solute-binding protein, family 5.
 
 0.973
EFL22161.1
Oligopeptide ABC transporter, permease.
 
 0.914
EFL29172.1
Peptide/opine/nickel uptake family ABC transporter, permease.
 
 0.914
EFL27424.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.913
EFL28066.1
Putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.912
EFL28011.1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 0.910
EFL23010.1
Peptide ABC transporter, permease.
 
 0.908
EFL23046.1
Dipeptide transporter 1 (ABC superfamily, membrane).
 
 0.908
EFL23466.1
Oligopeptide ABC transporter, permease.
 
 0.908
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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