STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20537.1Extracellular solute-binding protein, family 5. (538 aa)    
Predicted Functional Partners:
EFL20536.1
Nickel ABC transporter, permease.
 
 0.975
EFL20535.1
ABC transporter, permease.
 
 0.973
EFL20534.1
ABC transporter dipeptide permease.
 
 0.959
EFL28703.1
Putative transport system permease protein.
 
 0.954
EFL27425.1
Putative transport system permease protein.
 
 0.953
EFL28050.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.918
EFL28366.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein.
 
 0.917
EFL20533.1
Putative peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.828
EFL28068.1
ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, permease.
 
 0.823
EFL29172.1
Peptide/opine/nickel uptake family ABC transporter, permease.
 
 0.816
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.