STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20540.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EFL20541.1
Putative glycolate oxidase, subunit GlcD.
       0.572
EFL20542.1
Methionine import ATP-binding protein MetN 1.
       0.446
EFL20534.1
ABC transporter dipeptide permease.
       0.430
EFL20535.1
ABC transporter, permease.
       0.430
EFL20536.1
Nickel ABC transporter, permease.
       0.430
EFL20537.1
Extracellular solute-binding protein, family 5.
       0.430
EFL20538.1
Acetyltransferase, GNAT family protein.
       0.430
EFL20539.1
Aminotransferase, class I and II family protein.
       0.430
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.