STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20546.1Nitrilotriacetate monooxygenase component A; Overlaps another CDS with the same product name. (454 aa)    
Predicted Functional Partners:
EFL20548.1
acyl-CoA dehydrogenase.
 
    0.916
EFL20547.1
Nitrilotriacetate monooxygenase component A; Overlaps another CDS with the same product name.
 
    
0.791
EFL20544.1
D-methionine ABC transporter, permease.
      0.781
EFL20545.1
D-methionine ABC transporter, periplasmic D-methionine-binding protein.
 
    0.779
EFL20543.1
Methionine import ATP-binding protein MetN 1.
       0.773
EFL21586.1
FMN reductase.
 
 0.765
EFL22126.1
FMN reductase.
 
 0.747
EFL21581.1
SsuD family monooxygenase.
 
    0.743
EFL28816.1
Alkanesulfonate monooxygenase.
  
    0.741
EFL20559.1
SsuD family monooxygenase.
 
    0.730
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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