Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL20562.1Rrf2 family protein. (152 aa)    
Predicted Functional Partners:
EFL26784.1
Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Belongs to the sulfur carrier protein TusA family.
 
 
 0.906
EFL23039.1
Cysteine desulfurase; Truncated CDS; unextendable partial coding region.
  
 
 0.890
EFL27022.1
NifU family SUF system FeS assembly protein.
  
  
 0.746
EFL20563.1
acyl-CoA dehydrogenase domain-containing protein.
       0.684
EFL23407.1
Thiazole biosynthesis adenylyltransferase ThiF.
  
 
 0.626
EFL27283.1
Beta-galactosidase.
       0.572
EFL20552.1
Putative cupin domain protein.
       0.538
EFL20561.1
Conserved hypothetical protein; Unextendable partial coding region.
       0.448
EFL26412.1
alpha-N-arabinofuranosidase.
       0.431
EFL22809.1
Sensor histidine kinase/response regulator.
  
  
 0.430
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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