STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20568.1Conserved hypothetical protein. (428 aa)    
Predicted Functional Partners:
EFL28350.1
Endo-polygalacturonase.
 
     0.685
EFL23873.1
Putative secreted protein.
  
   
 0.671
EFL20567.1
Beta-lactamase.
       0.652
EFL20431.1
Conserved hypothetical protein.
  
     0.610
EFL21850.1
Hypothetical protein.
  
  
  0.548
EFL28409.1
Putative pectinesterase/pectate lyase protein.
 
   
 0.536
EFL28986.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
     0.524
EFL22182.1
Methionine biosynthesis MetW; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.521
EFL28212.1
Putative endo-1,4-beta-xylanase.
  
   
 0.501
EFL28005.1
Putative secreted protein; Truncated CDS.
  
     0.500
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.