STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20578.1DNA-binding protein. (338 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.995
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.989
EFL20579.1
phytanoyl-CoA dioxygenase.
 
     0.951
EFL20580.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
     0.863
EFL20581.1
Putative myo-inositol 2-dehydrogenase.
 
    0.855
EFL22415.1
Sugar ABC transporter, ATP-binding protein.
  
 0.761
EFL26004.1
Sugar ABC transporter, ATP-binding protein.
  
 0.760
EFL22416.1
Sugar ABC-type transport permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.736
EFL26005.1
Sugar ABC-type transport permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.736
rbsD
Cytoplasmic D-ribose-binding protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.682
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.