Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL20579.1phytanoyl-CoA dioxygenase. (392 aa)    
Predicted Functional Partners:
EFL20578.1
DNA-binding protein.
 
     0.945
EFL20580.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
 
  0.923
EFL20581.1
Putative myo-inositol 2-dehydrogenase.
 
    0.904
EFL26010.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
   
 0.700
EFL26007.1
Putative myo-inositol catabolism protein IolC.
  
  
 0.663
EFL20582.1
Oxidoreductase, NAD-binding.
  
    0.645
iolG
Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
    0.571
EFL26006.1
Putative ABC-type sugar transport system.
 
     0.548
EFL20506.1
Putative ABC-type sugar transport system.
 
     0.542
EFL26004.1
Sugar ABC transporter, ATP-binding protein.
  
     0.514
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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