STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20583.1Sugar phosphate isomerase/epimerase. (285 aa)    
Predicted Functional Partners:
EFL28327.1
Putative 4-hydroxyphenylpyruvate dioxygenase; Truncated CDS; unextendable partial coding region.
 
  
  0.799
EFL23765.1
PTS system, fructose-specific family, IIABC component.
 
 
  0.724
EFL27670.1
Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
 
 
  0.691
EFL25612.1
PTS system, fructose-specific IIABC component.
  
 
  0.687
EFL26010.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
 
 0.625
EFL26009.1
IolB protein.
  
  
 0.534
EFL20608.1
4-amino-4-deoxychorismate synthase, component I.
    
  0.521
EFL22263.1
Anthranilate synthase, phenazine specific.
    
  0.521
EFL26817.1
Anthranilate synthase, phenazine specific.
    
  0.521
EFL27772.1
Oxidoreductase.
  
 
 0.507
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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