STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20616.1Putative membrane protein SCJ1.26. (159 aa)    
Predicted Functional Partners:
EFL20617.1
Conserved hypothetical protein.
 
     0.746
EFL26506.1
Sensory box histidine kinase/response regulator.
  
     0.659
EFL27452.1
Alpha/beta hydrolase.
   
    0.652
EFL25040.1
Putative membrane protein.
  
     0.617
EFL24578.1
Conserved hypothetical protein.
  
     0.603
EFL27317.1
Putative transcriptional regulator, LysR family.
  
     0.592
EFL29193.1
Conserved hypothetical protein.
  
     0.560
EFL28471.1
Putative regulatory protein.
  
     0.535
EFL24494.1
Putative Hsp18 transcriptional regulator.
  
     0.524
EFL21042.1
Succinoglycan biosynthesis protein.
   
    0.517
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.