STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20620.1Galactonate dehydratase. (381 aa)    
Predicted Functional Partners:
EFL20621.1
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinC.
 
  
  0.851
EFL26435.1
Galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 
0.787
EFL28508.1
D-mannonate oxidoreductase (Fructuronate reductase); Belongs to the mannitol dehydrogenase family.
 
  
 0.739
EFL22434.1
2-dehydro-3-deoxygluconokinase.
 
  
  0.736
EFL23126.1
2-keto-3-deoxygluconate kinase.
 
  
  0.735
EFL28847.1
D-mannonate oxidoreductase (Fructuronate reductase); Belongs to the mannitol dehydrogenase family.
 
  
 0.733
EFL22319.1
Mandelate racemase/muconate lactonizing enzyme family protein.
  
  
 
0.706
EFL23592.1
Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.705
EFL23572.1
2-keto-3-deoxygluconate kinase.
 
  
  0.703
EFL22108.1
Mandelate racemase/muconate lactonizing enzyme family protein.
  
  
 
0.699
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.