STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20631.1Conserved hypothetical protein. (156 aa)    
Predicted Functional Partners:
EFL26930.1
Glutamate synthase large subunit.
    
 0.797
EFL27277.1
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Truncated CDS.
    
  0.684
EFL23529.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.681
EFL21241.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.586
EFL21533.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.586
EFL21240.1
Electron transfer flavoprotein, alpha subunit.
   
 
 0.555
EFL21532.1
Electron transfer flavoprotein, alpha subunit.
   
 
 0.555
EFL26516.1
Putative integral membrane protein.
  
     0.544
EFL24120.1
Putative two-component system sensor kinase.
  
     0.523
EFL24400.1
Putative integral membrane protein.
  
    0.516
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.