STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20639.1GntR family transcriptional regulator. (252 aa)    
Predicted Functional Partners:
EFL21257.1
GntR family transcriptional regulator.
  
  
 0.771
EFL21333.1
L-asparagine operon repressor (GntR family); Truncated CDS.
  
  
 0.765
EFL24425.1
Putative GntR-family transcriptional regulator.
  
     0.742
EFL22184.1
GntR-family transcriptional regulator.
  
  
 0.740
EFL20589.1
Putative transcriptional regulator, GntR family protein; Unextendable partial coding region.
  
     0.739
EFL20636.1
Peptide synthase.
 
     0.735
EFL20514.1
Putative transcriptional regulator.
  
     0.732
EFL28902.1
Regulatory protein GntR, HTH.
  
  
 0.723
EFL20638.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.695
EFL20637.1
3-oxoadipate enol-lactonase.
       0.690
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.